| mlmm.gwas.FMI {mlmm.gwas} | R Documentation |
Dataset for examples with the mlmm.gwas package, male+female and male+female+interaction models
Description
Species: Helianthus annuus
Individuals: 303
Markers: 500
Usage
data(mlmm.gwas.FMI)
Format
floweringDateFMI: a named numeric vector of length 303.
female: a factor of length 303
male: a factor of length 303
hybrid: a factor of length 303
Xf: a 303x500 numeric matrix
Xm: a 303x500 numeric matrix
Xfm: a 303x500 numeric matrix
K.female: 36x36 numeric matrix
K.male: 36x36 numeric matrix
K.hybrid: 303x303 numeric matrix
Details
Variables:
floweringDateFMI: flowering dates in °C.day, time since sowing.
female: names of the female parent of the individuals
male: names of the male parent of the individuals
hybrid: names of the hybrids (name of female and male)
Xf: female genotype matrix (additive)
Xm: male genotype matrix (dominance)
Xfm: female-male interaction genotype matrix (dominance)
K.female: female "kinship" matrix (additive)
K.male: male "kinship" matrix (dominance)
K.hybrid: hybrid "kinship" matrix (dominance)