minimap2_installation {minimapR}

minimap2_installation

Description

This function prints installation instructions specific to the user's operating system.

Usage

minimap2_installation(source_directory, verbose = TRUE, return = FALSE)

Arguments

source_directory

Source directory to install minimap2. Do not include minimap2 name in the source directory. Note that this must be entered as a full path location.

verbose

Logical value to print progress of the installation

return

This logical value causes the minimap2_install function to return the path of minimap2

Value

This function returns the path of the installed 'minimap2' tool (character).

Examples

## Not run: 
install_dir <- file.path("/dir/to/install")
minimap2_path <- minimap2_installation(source_directory = install_dir, verbose = FALSE)

## End(Not run)