combine_search_string_result_from_list {minSNPs}

combine_search_string_result_from_list

Description

combine_search_string_result_from_list combines the search results from search_from_fastq_reads

Usage

combine_search_string_result_from_list(
  results,
  search_table,
  append_to_current_result = data.frame(),
  bp = MulticoreParam()
)

Arguments

results

the dataframes from search_from_fastq_reads to combine.

search_table

a dataframe with the following columns: - "id","type","sequence","strand","result","extra","match_ref_seq"

append_to_current_result

the dataframe of previous result to append to

bp

BiocParallel backend to use for parallelization

Value

will return a dataframe containing: - 'sequence', 'search_id', 'reads', 'raw_match', 'mean_qualities', 'indexes', 'id', 'type', 'strand', 'result', 'extra', 'match_ref_seq', 'n_reads'