otu_small {mikropml}

Small OTU abundance dataset

Description

A dataset containing relatives abundances of 60 OTUs for 60 human stool samples. This is a subset of the data provided in extdata/otu_large.csv, which was used in Topçuoğlu et al. 2020.

Usage

otu_small

Format

A data frame with 60 rows and 61 variables. The dx column is the diagnosis: healthy or cancerous (colorectal). All other columns are OTU relative abundances.