miic.write.network.cytoscape {miic}

GraphML converting function for miic graph

Description

Convert miic graph to GraphML format.

Usage

miic.write.network.cytoscape(g, file, layout = NULL)

Arguments

g

The graph object returned by miic.

file

A string. Path to the output file containing file name without extension (.graphml will be appended).

layout

An optional data frame of 2 (or 3) columns containing the coordinate x and y for each node. The optional first column can contain node names. If node names is not given, the order of the input file will be assigned to the list of positions.