quickPlot1 {microPop}

Generic plotting showing results of microPop

Description

Generic plotting showing results of microPop

Usage

quickPlot1(
  soln,
  numR,
  numStrains,
  microbeNames,
  yLabel,
  xLabel,
  sumOverStrains,
  resourceLegendPosition = "topleft",
  microbeLegendPosition = "topleft",
  saveFig = FALSE,
  figType = "eps",
  figName = "microPopFig"
)

Arguments

soln

ODE output from microPopModel() i.e. matrix out$solution

numR

Scalar. Number of resources

numStrains

Scalar. Number of strains per group

microbeNames

Vector of strings which contains the names of the microbial groups in the system e.g. c('Bacteroides','Acetogens')

yLabel

String for y axis label

xLabel

String for x axis label

sumOverStrains

Logical

resourceLegendPosition

String. Position of legend in resource plot, default is 'topleft'

microbeLegendPosition

String. Position of legend in microbe plot, default is 'topleft'

saveFig

Logical. Default is FALSE

figType

String. Default is "eps"

figName

String. Default is "microPopFig"

Value

Nothing just generates a plot