massBalanceFuncDefault {microPop}

mass balance Function

Description

Doesn't return anything but prints to screen if mass does not balance after the equations for biological growth have been derived This is only run if checkMassConv is TRUE

Usage

massBalanceFuncDefault(uptake, production, growthRate, balanceTol, strainName)

Arguments

uptake

Matrix (with names) where columns are resources and rows are pathways, giving uptake rate (mass/time) of given strain

production

Matrix (with names) where columns are resources and rows are pathways, giving production rate (mass/time) of given strain

growthRate

(vector) microbial growth rate (mass per unit time) for one strain on each metabolic pathway

balanceTol

(scalar) Defined in microPopModel input list checkingOptions

strainName

(string) Name of strain in ODE solver loop