getStrainPHcorners {microPop}

get stochastically generated pH corners for each strain

Description

Returns the values of the pH values of the limit function i.e. where the limit is c(0,1,1,0) Reads these in from the microbe group dataframes

Usage

getStrainPHcorners(
  microbeNames,
  allStrainNames,
  numStrains,
  pHcorners,
  pHLimit,
  strainOptions,
  oneStrainRandomParams
)

Arguments

microbeNames

(vector of strings). Names of microbes in the system

allStrainNames

(vector of strings)

numStrains

Integer or named vector of integers

pHcorners

vector of 4 scalars definining the pH lim func

pHLimit

(logical) Is microbial growth affected by pH?

strainOptions

list from microPopModel inputs

oneStrainRandomParams

logical from microPopModel inputs

Value

(matrix) values of the pH values of the limit function i.e. where the limit is c(0,1,1,0) for each strain