metanet_pipe {metanetwork}

Execute 'metanetwork' pipeline

Description

Method executing the whole metanetwork pipeline for the initial metanetwork object (append_agg_nets, compute_TL, attach_layout)

Usage

metanet_pipe(metanetwork, beta = 0.1, verbose = TRUE)

## S3 method for class 'metanetwork'
metanet_pipe(metanetwork, beta = 0.1, verbose = TRUE)

Arguments

metanetwork

object of class 'metanetwork'

beta

the diffusion parameter of the diffusion kernel, a positive scalar controlling the squeezing of the network

verbose

a boolean indicating whether message along the pipeline should be printed

Value

object of class 'metanetwork', with computed trophic levels and layout stored as node attribute

NULL

Examples

library(metanetwork)
library(igraph)

g = make_lattice(dimvector = c(4,4),2,3,directed = TRUE)
meta0 = build_metanet(g)
meta0 = metanet_pipe(meta0)
ggmetanet(meta0)