plot.ge_reg {metan}

Plot an object of class ge_reg

Description

Plot the regression model generated by the function ge_reg.

Usage

## S3 method for class 'ge_reg'
plot(
  x,
  var = 1,
  type = 1,
  plot_theme = theme_metan(),
  x.lim = NULL,
  x.breaks = waiver(),
  x.lab = NULL,
  y.lim = NULL,
  y.breaks = waiver(),
  y.lab = NULL,
  leg.position = "right",
  size.tex.lab = 12,
  ...
)

Arguments

x

An object of class ge_factanal

var

The variable to plot. Defaults to var = 1 the first variable of x.

type

The type of plot to show. type = 1 produces a plot with the environmental index in the x axis and the genotype mean yield in the y axis. type = 2 produces a plot with the response variable in the x axis and the slope/deviations of the regression in the y axis.

plot_theme

The graphical theme of the plot. Default is plot_theme = theme_metan(). For more details, see ggplot2::theme().

x.lim

The range of x-axis. Default is NULL (maximum and minimum values of the data set). New arguments can be inserted as x.lim = c(x.min, x.max).

x.breaks

The breaks to be plotted in the x-axis. Default is ⁠authomatic breaks⁠. New arguments can be inserted as x.breaks = c(breaks)

x.lab

The label of x-axis. Each plot has a default value. New arguments can be inserted as x.lab = "my label".

y.lim

The range of x-axis. Default is NULL. The same arguments than x.lim can be used.

y.breaks

The breaks to be plotted in the x-axis. Default is ⁠authomatic breaks⁠. The same arguments than x.breaks can be used.

y.lab

The label of y-axis. Each plot has a default value. New arguments can be inserted as y.lab = "my label".

leg.position

The position of the legend.

size.tex.lab

The size of the text in the axes text and labels. Default is 12.

...

Currently not used..

Value

An object of class ⁠gg, ggplot⁠.

Author(s)

Tiago Olivoto [e-mail]

See Also

ge_factanal()

Examples

library(metan)
model <- ge_reg(data_ge2, ENV, GEN, REP, PH)
plot(model)