calcfit2Diffrep {metaMA}

Empirical Bayes statistics from limma analysis with unpaired data

Description

Computes empirical Bayes statistics from limma analysis with only one group effect.

Usage

calcfit2Diffrep(C1, C2)

Arguments

C1

Gene expression data of the arrays in the first condition. Each row of C1 corresponds to one spot, each column to one replicate.

C2

Gene expression data of the arrays in the second condition. Each row of C2 corresponds to one spot, each column to one replicate.

Details

Returns fit2 described in limma vignette. To be used with unpaired data.

Value

fit2

Note

see Bioconductor limma vignette