Mixed Effects Regression for Linear, Non-Linear and User-Defined Models


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Documentation for package ‘merlin’ version 0.1.0

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coef.merlin Extract Model Coefficients
coef.mlrcs Extract Model Coefficients
coef.mlsurv Extract Model Coefficients
coef.summary.merlin Extract Model Coefficients
coef.summary.mlrcs Extract Model Coefficients
coef.summary.mlsurv Extract Model Coefficients
heart.valve Aortic valve replacement surgery data
heart.valve.merlin Aortic valve replacement surgery data
logLik.merlin Extract Log-Likelihood
logLik.mlrcs Extract Log-Likelihood
logLik.mlsurv Extract Log-Likelihood
logLik.summary.merlin Extract Log-Likelihood
logLik.summary.mlrcs Extract Log-Likelihood
logLik.summary.mlsurv Extract Log-Likelihood
merlin merlin - Mixed Effects Regression for Linear, Nonlinear and User-defined models
merlin_util_ap merlin_util_ap - returns the current estimate of the ith ancillary parameter for the associated model
merlin_util_ap_mod merlin_util_ap_mod - returns the current estimate of the ith ancillary parameter for the specified model
merlin_util_depvar merlin_util_depvar - returns the response variable(s)
merlin_util_ev merlin_util_ev - returns the observation-level expected value of the outcome
merlin_util_ev_deriv merlin_util_ev_deriv - returns the first derivative with respect to time of the observation-level expected value of the outcome
merlin_util_ev_deriv2 merlin_util_ev_deriv2 - returns the second derivative with respect to time of the observation-level expected value of the outcome
merlin_util_ev_deriv2_mod merlin_util_ev_deriv2_mod - returns the second derivative with respect to time of the observation-level expected value of the specified outcome
merlin_util_ev_deriv_mod merlin_util_ev_deriv - returns the first derivative with respect to time of the observation-level expected value of the specified outcome
merlin_util_ev_integ merlin_util_ev_integ - returns the integral with respect to time of the observation-level expected value of the outcome
merlin_util_ev_integ_mod merlin_util_ev_integ_mod - returns the integral with respect to time of the observation-level expected value of the specified outcome
merlin_util_ev_mod merlin_util_ev_mod - returns the observation-level expected value of the outcome for a specified model
merlin_util_timevar merlin_util_timevar - returns the time variable
merlin_util_xzb merlin_util_xzb - returns the observation-level complex predictor
merlin_util_xzb_deriv merlin_util_xzb_deriv - returns the first derivative with respect to time of the observation-level complex predictor
merlin_util_xzb_deriv2 merlin_util_xzb_deriv2 - returns the second derivative with respect to time of the observation-level complex predictor
merlin_util_xzb_deriv2_mod merlin_util_xzb_deriv2_mod - returns the second derivative with respect to time of the observation-level complex predictor of the specified model
merlin_util_xzb_deriv_mod merlin_util_xzb_deriv_mod - returns the first derivative with respect to time of the observation-level complex predictor of a specified model
merlin_util_xzb_integ merlin_util_xzb_integ - returns the integral with respect to time of the observation-level complex predictor
merlin_util_xzb_integ_mod merlin_util_xzb_integ_mod - returns the integral with respect to time of the observation-level complex predictor of the specified model
merlin_util_xzb_mod merlin_util_xzb_mod - returns the observation-level complex predictor of the specified model
mlrcs Fit multi-level restricted cubic spline model
mlsurv Fit proportional hazards survival models
pbc Mayo Clinic primary biliary cirrhosis data
pbc.merlin Mayo Clinic primary biliary cirrhosis data
predict.merlin predict.merlin - post-estimation tools for merlin
print.merlin Print 'merlin' Fits
print.mlrcs Print 'mlrcs' Fits
print.mlsurv Print 'mlsurv' Fits
print.summary.merlin Summarizing 'merlin' Fits
print.summary.mlrcs Summarizing 'mlrcs' Fits
print.summary.mlsurv Summarizing 'mlsurv' Fits
sim3 Simulated 3-level survival data
summary.merlin Summarizing 'merlin' Fits
summary.mlrcs Summarizing 'mlrcs' Fits
summary.mlsurv Summarizing 'mlsurv' Fits
vcov.merlin Calculate Variance-Covariance Matrix for a 'merlin' Model Object
vcov.mlrcs Calculate Variance-Covariance Matrix for a 'mlrcs' Model Object
vcov.mlsurv Calculate Variance-Covariance Matrix for a 'mlsurv' Model Object
vcov.summary.merlin Calculate Variance-Covariance Matrix for a 'merlin' Model Object
vcov.summary.mlrcs Calculate Variance-Covariance Matrix for a 'mlrcs' Model Object
vcov.summary.mlsurv Calculate Variance-Covariance Matrix for a 'mlsurv' Model Object