Manipulate MCMC Samples

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Documentation for package ‘mcmcr’ version 0.6.1

• DESCRIPTION file.
• Package NEWS.

Help Pages

A B C E F I M N P R S V Z

-- A --

as.mcarray	Coerce to an mcarray object
as.mcmc.mcarray	Markov Chain Monte Carlo Objects
as.mcmc.mcmc	Markov Chain Monte Carlo Objects
as.mcmc.mcmcarray	Markov Chain Monte Carlo Objects
as.mcmc.mcmcr	Markov Chain Monte Carlo Objects
as.mcmcarray	Coerce to an mcmcarray object
as.mcmcr	Convert to an mcmcr object
as.mcmcr.list	Coerce to an mcarray object
as.mcmcr.mcarray	Convert to an mcmcr object
as.mcmcr.mcmc	Convert to an mcmcr object
as.mcmcr.mcmc.list	Convert to an mcmcr object
as.mcmcr.mcmcarray	Convert to an mcmcr object
as.mcmcr.mcmcrs	Convert to an mcmcr object
as.mcmcr.nlist	Convert to an mcmcr object
as.mcmcr.nlists	Convert to an mcmcr object
as.mcmcrs	Convert to an mcmcrs object
as.mcmcrs.list	Convert to an mcmcrs object
as.mcmcrs.mcmcr	Convert to an mcmcrs object
as_nlist.mcmcr	Coerce to nlist
as_nlists.mcmcr	Coerce to nlists

-- B --

bind_chains.mcarray	Bind by Chains.
bind_chains.mcmc	Bind by Chains.
bind_chains.mcmc.list	Bind by Chains.
bind_chains.mcmcarray	Bind by Chains.
bind_chains.mcmcr	Bind by Chains.
bind_dimensions	Combine two MCMC objects by dimensions
bind_dimensions_n	Combine multiple MCMC objects by parameter dimensions
bind_parameters	Combine two MCMC object by parameters

-- C --

check_mcmcarray	\Sexpr[results=rd, stage=render]{lifecycle::badge("soft-deprecated")} Check mcmcarray
check_mcmcr	\Sexpr[results=rd, stage=render]{lifecycle::badge("soft-deprecated")} Check mcmcr
chk_mcmcarray	Check MCMC objects
chk_mcmcr	Check MCMC objects
chk_mcmcrs	Check MCMC objects
coef	Term coefficients
coef.mcmc	Term coefficients
collapse_chains.mcmcr	Collapse Chains
combine_dimensions	Combine samples by dimensions
combine_samples	Combine MCMC samples of two objects
combine_samples_n	Combine MCMC samples of multiple objects
converged.default	Converged
converged.mcmcrs	Converged

-- E --

esr.mcarray	Effective Sampling Rate
esr.mcmc	Effective Sampling Rate
esr.mcmc.list	Effective Sampling Rate
esr.mcmcarray	Effective Sampling Rate
esr.mcmcr	Effective Sampling Rate
esr.mcmcrs	Effective Sampling Rate
ess	P-Value effective sample size
estimates.mcarray	Estimates
estimates.mcmc	Estimates
estimates.mcmc.list	Estimates
estimates.mcmcarray	Estimates
estimates.mcmcr	Estimates

-- F --

fill_all.mcarray	Fill All Values
fill_all.mcmcarray	Fill All Values
fill_all.mcmcr	Fill All Values
fill_na.mcarray	Fill Missing Values
fill_na.mcmcarray	Fill Missing Values
fill_na.mcmcr	Fill Missing Values

-- I --

is.mcarray	Is mcarray object
is.mcmcarray	Is mcmcarray object
is.mcmcr	Is mcmcr object
is.mcmcrs	Is mcmcrs object

-- M --

mcmcarray-object	mcmcarray
mcmcarray_object	mcmcarray
mcmcr-object	mcmcr
mcmcrs	Create mcmcrs
mcmcrs-object	mcmcrs
mcmcrs_object	mcmcrs
mcmcr_example	An example mcmcr object
mcmcr_object	mcmcr
mcmc_aperm	MCMC object transposition
mcmc_map	MCMC map

-- N --

nchains.mcarray	Number of Chains
nchains.mcmcarray	Number of Chains
nchains.mcmcr	Number of Chains
nchains.mcmcrs	Number of Chains
niters.mcarray	Number of Iterations
niters.mcmcarray	Number of Iterations
niters.mcmcr	Number of Iterations
niters.mcmcrs	Number of Iterations
npars.mcarray	Number of Parameters
npars.mcmcarray	Number of Parameters
npars.mcmcr	Number of Parameters
npdims.mcmcarray	Number of Parameter Dimensions
npdims.mcmcr	Number of Parameter Dimensions
nterms.mcmcarray	Number of Terms
nterms.mcmcr	Number of Terms
nterms.mcmcrs	Number of Terms

-- P --

params	Parameter descriptions
pars.mcmcr	Parameter Names
pars.mcmcrs	Parameter Names
pdims.mcarray	Parameter Dimensions
pdims.mcmcarray	Parameter Dimensions
pdims.mcmcr	Parameter Dimensions

-- R --

rhat.mcarray	R-hat
rhat.mcmc	R-hat
rhat.mcmc.list	R-hat
rhat.mcmcarray	R-hat
rhat.mcmcr	R-hat
rhat.mcmcrs	R-hat

-- S --

set_pars.mcmcr	Set Parameters
set_pars.mcmcrs	Set Parameters
split_chains.mcmcarray	Split Chains
split_chains.mcmcr	Split Chains
subset	Subset an MCMC object
subset.mcmcarray	Subset an MCMC object
subset.mcmcr	Subset an MCMC object
subset.mcmcrs	Subset an MCMC object

-- V --

vld_mcmcarray	Validate MCMC objects
vld_mcmcr	Validate MCMC objects
vld_mcmcrs	Validate MCMC objects

-- Z --

zero	Zero MCMC sample values
zero.mcarray	Zero MCMC sample values
zero.mcmcarray	Zero MCMC sample values
zero.mcmcr	Zero MCMC sample values