| manhplot-package {manhplot} | R Documentation |
The Manhattan++ Plot
Description
This plot integrates annotation into a manhattan plot. The plot is implemented as a heatmap, which is binned using -log10(p-value) and chromosome position. Annotation currently supported is minor allele frequency and gene function high impact variants.
Details
The DESCRIPTION file:
| Package: | manhplot |
| Type: | Package |
| Title: | The Manhattan++ Plot |
| Depends: | R (>= 3.4.0) |
| Version: | 1.1 |
| Date: | 2019-11-25 |
| Author: | Chris Grace <cgrace@well.ox.ac.uk> |
| Maintainer: | Chris Grace <cgrace@well.ox.ac.uk> |
| Description: | This plot integrates annotation into a manhattan plot. The plot is implemented as a heatmap, which is binned using -log10(p-value) and chromosome position. Annotation currently supported is minor allele frequency and gene function high impact variants. |
| License: | GPL (>= 2) |
| RoxygenNote: | 6.1.1 |
| Imports: | reshape2, ggplot2, ggrepel, gridExtra |
| Suggests: | R.utils, testthat |
| URL: | https://github.com/cgrace1978/manhplot/ |
| BugReports: | https://github.com/cgrace1978/manhplot/issues |
| NeedsCompilation: | no |
| Packaged: | 2019-11-25 15:02:16 UTC; cgrace |
| Repository: | CRAN |
| Date/Publication: | 2019-06-04 11:40:03 UTC |
Index of help topics:
manhplot-package The Manhattan++ Plot manhplusplot Generate the manhattan++ plot
Author(s)
Chris Grace <cgrace@well.ox.ac.uk>
Maintainer: Chris Grace <cgrace@well.ox.ac.uk>
[Package manhplot version 1.1 Index]