atlastable {mand}

Result report with atlas data

Description

This function refers to the results obtained by the analysis in an atlas image, and reports a summary of the results for each anatomical region.

Usage

atlastable(x, y, atlasdataset = NULL, ROIids = NULL, ...)

## S3 method for class 'atlastable'
print(x, ...)

Arguments

x

an array for the atlas image.

y

an array for the result image.

atlasdataset

a matrix or data.frame. The colnames should include "ROIid" and "ROIname".

ROIids

a vector indicating ROI id shown in the result.

...

further arguments passed to or from other methods.

Details

atlastable requires the atlas image and data frame including the ROI id and the name.

Examples

data(diffimg)
data(atlasdatasets)
data(atlas)
atlasname = "aal3"
atlasdataset = atlasdatasets[[atlasname]]
tmpatlas = atlas[[atlasname]]
atlastable(tmpatlas, diffimg, atlasdataset=atlasdataset, ROIids = c(1:2, 41:44))