map_lipid_names {lipidomeR} | R Documentation |
Enumerate lipid names into values about lipid class, size and saturation
Description
Use this function to create a mapping of the lipids to values, which can be used to creating 'lipidomeR' heatmaps.
Usage
map_lipid_names(x)
Arguments
x |
(Required) character vector of lipid names. The names are expected in the format 'XY(C:D)', where 'XY' is the abbreviation of the lipid class, 'C' is the total number of carbon atoms in the fatty-acid chains, and 'D' is the total number of double-bonds in the fatty acid chains. |
Value
Data frame with lipid names in various formats for R and
the enumerated values of lipid class (Class
), lipid size
(N.carbons
) and lipid unsaturation (N.double.bonds
).
See Also
heatmap_lipidome_from_limma
for creating 'lipidomeR'
heatmaps of regression model results based on the output of this function.
heatmap_lipidome
for creating 'lipidomeR' heatmaps
of any lipid-specific values based on the output of this function.