Quantify Rhythmicity and Differential Rhythmicity in Genomic Data

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Documentation for package ‘limorhyde2’ version 0.1.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

getDiffRhythmStats	Compute differential rhythm statistics from fitted models
getExpectedMeas	Compute expected measurements from fitted models
getExpectedMeasIntervals	Compute credible intervals for expected measurements
getModelFit	Fit linear models for rhythmicity in one or more conditions
getPosteriorFit	Compute posterior fit for linear models for rhythmicity
getPosteriorSamples	Draw samples from posterior distributions of fitted models
getRhythmStats	Compute rhythm statistics from fitted models
getStatsIntervals	Compute credible intervals for rhythm or differential rhythm statistics
GSE34018	Gene expression data for GSE34018
GSE54650	Gene expression data for GSE54650
mergeMeasMeta	Merge measurements and metadata