Joint Modelling of Functional Traits


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Documentation for package ‘jtdm’ version 0.1-2

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ellipse_plot Partial response curve of the pairwise most suitable community-level strategy and of the pairwise envelop of possible community-level strategy
getB Get the inferred regression coefficients
get_sigma Get the inferred residual covariance matrix
global Global
joint_trait_prob Computes joint probabilities.
joint_trait_prob_gradient Computes partial response curves of joint probabilities
jtdmCV K-fold cross validation predictions and goodness of fit metrics
jtdm_fit Fitting joint trait distribution models
jtdm_predict Predict method for joint trait distribution model
partial_response Computes and plots the trait-environment relationship of a given CWM trait and a given environmental variable
plot.jtdm_fit Plots the parameters of a fitted jtdm
summary.jtdm_fit Prints the summary of a fitted jtdm
X Site x environmental covariates dataset
Y Site x CWM traits dataset