coxModule {jsmodule}

coxModule: shiny modulde server for Cox's model.

Description

Shiny modulde server for Cox's model.

Usage

coxModule(
  input,
  output,
  session,
  data,
  data_label,
  data_varStruct = NULL,
  nfactor.limit = 10,
  design.survey = NULL,
  default.unires = T,
  limit.unires = 20,
  id.cluster = NULL,
  ties.coxph = "efron"
)

Arguments

input

input

output

output

session

session

data

reactive data

data_label

reactuve data label

data_varStruct

reactive list of variable structure, Default: NULL

nfactor.limit

nlevels limit in factor variable, Default: 10

design.survey

reactive survey data. default: NULL

default.unires

Set default independent variables using univariate analysis.

limit.unires

Change to default.unires = F if number of independent variables > limit.unires, Default: 20

id.cluster

reactive cluster variable if marginal cox model, Default: NULL

ties.coxph

'coxph' ties option, one of 'efron', 'breslow', 'exact', default: 'erfon'

Details

Shiny modulde server for Cox's model.

Value

Shiny modulde server for Cox's model.

Examples

library(shiny)
library(DT)
library(data.table)
library(jstable)
ui <- fluidPage(
  sidebarLayout(
    sidebarPanel(
      coxUI("cox")
    ),
    mainPanel(
      DTOutput("coxtable")
    )
  )
)

server <- function(input, output, session) {
  data <- reactive(mtcars)
  data.label <- reactive(jstable::mk.lev(mtcars))

  out_cox <- callModule(coxModule, "cox",
    data = data, data_label = data.label,
    data_varStruct = NULL
  )

  output$coxtable <- renderDT({
    datatable(out_cox()$table, rownames = T, caption = out_cox()$caption)
  })
}