Simulation-Based Maximum Likelihood Parameter Estimation
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Documentation for package ‘jaatha’ version 3.2.5
Help Pages
| boot_jaatha | Parametric Bootstrapping of Jaatha Estimates |
| coarsen_jsfs | Divides the joint site frequency spectrum (jsfs) into blocks and returns the sum of the jsfs entries for each block. |
| create_jaatha_data | Prepare the observed data for Jaatha |
| create_jaatha_data.default | Prepare the observed data for Jaatha |
| create_jaatha_model | Specify a Model for a Jaatha Analysis |
| create_jaatha_model.coalmodel | Use a coala model in Jaatha |
| create_jaatha_model.default | For other uappropriate create_jaatha_model will throw an error |
| create_jaatha_model.function | Specify a jaatha model using a simulation function |
| create_jaatha_stat | Create a summary statistic for Jaatha |
| estimate_llh | Estimate the Log-Likelihood for a given parameter combination |
| jaatha | Simulation based maximum likelihood estimation |