boot_jaatha |
Parametric Bootstrapping of Jaatha Estimates |
coarsen_jsfs |
Divides the joint site frequency spectrum (jsfs) into blocks and returns the sum of the jsfs entries for each block. |
create_jaatha_data |
Prepare the observed data for Jaatha |
create_jaatha_data.default |
Prepare the observed data for Jaatha |
create_jaatha_model |
Specify a Model for a Jaatha Analysis |
create_jaatha_model.coalmodel |
Use a coala model in Jaatha |
create_jaatha_model.default |
For other uappropriate create_jaatha_model will throw an error |
create_jaatha_model.function |
Specify a jaatha model using a simulation function |
create_jaatha_stat |
Create a summary statistic for Jaatha |
estimate_llh |
Estimate the Log-Likelihood for a given parameter combination |
jaatha |
Simulation based maximum likelihood estimation |