Stochastic Island Biogeography Theory Made Easy

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Documentation for package ‘island’ version 0.2.10

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

akaikeic	Akaike Information Criterion
akaikeicc	Akaike Information Criterion
all_environmental_fit	Environmental fit for a single dataset
alonso15	Lakshadweep Archipelago coral fish community reassembly
cetotrans	From rates to probabilities
custom_environmental_fit	Environmental fit for a single dataset
data_generation	Data simulation of colonization-extinction dynamics
greedy_environmental_fit	Environmental fit for a single dataset
ibd_models	Inmigration, birth, death- models
idaho	Mapped plant community time series, Dubois, ID
irregular_multiple_datasets	c/e rates for irregular samplings in multiple datasets
irregular_single_dataset	c/e rates for irregular samplings in a dataset
lakshadweep	Lakshadweep Archipelago coral fish community reassembly data (expanded)
lakshadweepPLUS	Lakshadweep Archipelago coral fish community reassembly data in a single data frame
mss_cedp	Likelihood approach for estimating colonization/extinction with perfect or imperfect detectability
NLL_env	Environmental fit for a single dataset
NLL_imd	c/e rates for irregular samplings in multiple datasets
NLL_isd	c/e rates for irregular samplings in a dataset
NLL_rss	c/e rates for a regular sampling scheme
null_model	Model prediction error
PA_simulation	Data simulation of colonization-extinction dynamics
rates_calculator	Colonization and extinction rates calculator for expressions.
regular_sampling_scheme	c/e rates for a regular sampling scheme
r_squared	Model prediction error
simberloff	Simberloff and Wilson original defaunation experiment data
simulated_model	Model prediction error
sss_cedp	MacKenzie etal (2003) likelihood approach for estimating colonization/extinction parameters (with imperfect detectability)
upgma_model_selection	Model selection function based on a upgma grouping algorithm
weight_of_evidence	Weight of evidence