interplex {interplex} | R Documentation |
interplex package
Description
This is a helper package to coerce simplicial complexes between different data structures.
Details
This package helps interface between different topological data analytic packages and workflows by coercing simplicial complex objects stored using different data structures. Each coercion is designed to retain as much annotation as possible, whether of simplices or of the complex.
The package supports coercions between simplicial complexes stored using the following data structures:
a complete list of simplices, as stored as
cmplx
values of filtration objects in the TDA packagean object of class 'Rcpp_SimplexTree' as implemented in the simplextree package
an object of class 'gudhi.simplex_tree.SimplexTree' as implemented in Python GUDHI and imported via reticulate
an 'igraph' object, as implemented in the igraph package
a 'network' object, as implemented in the network package
Author(s)
Maintainer: Jason Cory Brunson cornelioid@gmail.com (ORCID)
Other contributors:
Yara Skaf [contributor]
See Also
Useful links: