toygroups {inlabru} | R Documentation |
Simulated 1D animal group locations and group sizes
Description
This data set serves to teach the concept of modelling species that gather in groups and where the grouping behaviour depends on space.
Usage
data(toygroups)
Format
The data are a list that contains these elements:
groups
:A
data.frame
of group locationsx
and sizesize
df.size
:IGNORE THIS
df.intensity
:A
data.frame
with Poisson process intensityd.lambda
at locationsx
df.rate
:A
data.frame
the locationsx
and associatedrate
which parameterized the exponential distribution from which the group sizes were drawn.
Examples
if (require(ggplot2, quietly = TRUE)) {
# Load the data
data("toygroups", package = "inlabru")
# The data set is a simulation of animal groups residing in a 1D space. Their
# locations in x-space are sampled from a Cox process with intensity
ggplot(toygroups$df.intensity) +
geom_line(aes(x = x, y = g.lambda))
# Adding the simulated group locations to this plot we obtain
ggplot(toygroups$df.intensity) +
geom_line(aes(x = x, y = g.lambda)) +
geom_point(data = toygroups$groups, aes(x, y = 0), pch = "|")
# Each group has a size mark attached to it.
# These group sizes are sampled from an exponential distribution
# for which the rate parameter depends on the x-coordinate
ggplot(toygroups$groups) +
geom_point(aes(x = x, y = size))
ggplot(toygroups$df.rate) +
geom_line(aes(x, rate))
}
[Package inlabru version 2.11.1 Index]