Compute, Handle and Plot Incidence of Dated Events

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Documentation for package ‘incidence2’ version 2.3.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

accessors	Access various elements of an incidence object
as.data.frame.incidence2	Convert incident object to a data frame
as.data.table.incidence2	Coerce to a data.table
as_incidence	Coerce to an incidence object
as_incidence.default	Coerce to an incidence object
as_incidence.incidence2	Coerce to an incidence object
as_tibble.incidence2	Coerce to a tibble
bootstrap_incidence	Bootstrap incidence time series
complete_dates	Complete dates for all group combinations
covidregionaldataUK	Regional data for COVID-19 cases in the UK
cumulate	Compute cumulative 'incidence'
estimate_peak	Estimate the peak date of an incidence curve
estimate_peaks	Estimate the peak date of an incidence curve
first_peak	Keep first, last and peak occurences
get_count_value	Access various elements of an incidence object
get_count_value.default	Access various elements of an incidence object
get_count_value.incidence2	Access various elements of an incidence object
get_count_value_name	Access various elements of an incidence object
get_count_value_name.default	Access various elements of an incidence object
get_count_value_name.incidence2	Access various elements of an incidence object
get_count_variable	Access various elements of an incidence object
get_count_variable.default	Access various elements of an incidence object
get_count_variable.incidence2	Access various elements of an incidence object
get_count_variable_name	Access various elements of an incidence object
get_count_variable_name.default	Access various elements of an incidence object
get_count_variable_name.incidence2	Access various elements of an incidence object
get_dates	Access various elements of an incidence object
get_dates_name	Access various elements of an incidence object
get_date_index	Access various elements of an incidence object
get_date_index.default	Access various elements of an incidence object
get_date_index.incidence2	Access various elements of an incidence object
get_date_index_name	Access various elements of an incidence object
get_date_index_name.default	Access various elements of an incidence object
get_date_index_name.incidence2	Access various elements of an incidence object
get_groups	Access various elements of an incidence object
get_groups.default	Access various elements of an incidence object
get_groups.incidence2	Access various elements of an incidence object
get_group_names	Access various elements of an incidence object
get_group_names.default	Access various elements of an incidence object
get_group_names.incidence2	Access various elements of an incidence object
incidence	Compute the incidence of events
incidence_	Compute the incidence of events (tidyselect compatible)
keep	Keep first, last and peak occurences
keep_first	Keep first, last and peak occurences
keep_last	Keep first, last and peak occurences
keep_peaks	Keep first, last and peak occurences
mutate.incidence2	Create, modify, and delete incidence2 columns
muted	Color palettes used in incidence
nest.incidence2	Nest rows into a list-column of data frames
palettes	Color palettes used in incidence
plot.incidence2	Plot an incidence object
regroup	Regroup 'incidence' objects
regroup_	Regroup 'incidence' objects (tidyselect compatible)
split.incidence2	Divide an incidence2 object in to it's implicit groupings
summarise.incidence2	Summarise each grouping down to one row
summary.incidence2	Summary of an incidence object
vibrant	Color palettes used in incidence