Compute, Handle, Plot and Model Incidence of Dated Events

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Documentation for package ‘incidence’ version 1.7.3

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Code demos. Use demo() to run them.
• Package NEWS.

Help Pages

"subset.incidence"	Subsetting 'incidence' objects
"[.incidence"	Subsetting 'incidence' objects
add_incidence_fit	Plot function for incidence objects
as.data.frame.incidence	Conversion of incidence objects
as.incidence	Conversion of incidence objects
as.incidence.data.frame	Conversion of incidence objects
as.incidence.matrix	Conversion of incidence objects
as.incidence.numeric	Conversion of incidence objects
bootstrap	Bootstrap incidence time series
cumulate	Compute cumulative 'incidence'
cumulate.default	Compute cumulative 'incidence'
cumulate.incidence	Compute cumulative 'incidence'
dim.incidence	Access various elements of an incidence object
estimate_peak	Estimate the peak date of an incidence curve using bootstrap
find_peak	Find the peak date of an incidence curve
fit	Fit exponential models to incidence data
fit_optim_split	Fit exponential models to incidence data
get_counts	Get counts from an incidence object
get_counts.incidence	Get counts from an incidence object
get_dates	Retrieve dates from an incidence object
get_dates.default	Retrieve dates from an incidence object
get_dates.incidence	Retrieve dates from an incidence object
get_fit	Accessors for 'incidence_fit' objects
get_fit.incidence_fit	Accessors for 'incidence_fit' objects
get_fit.incidence_fit_list	Accessors for 'incidence_fit' objects
get_info	Accessors for 'incidence_fit' objects
get_info.incidence_fit	Accessors for 'incidence_fit' objects
get_info.incidence_fit_list	Accessors for 'incidence_fit' objects
get_interval	Access various elements of an incidence object
get_interval.default	Access various elements of an incidence object
get_interval.incidence	Access various elements of an incidence object
get_n	Access various elements of an incidence object
get_n.default	Access various elements of an incidence object
get_n.incidence	Access various elements of an incidence object
get_timespan	Access various elements of an incidence object
get_timespan.default	Access various elements of an incidence object
get_timespan.incidence	Access various elements of an incidence object
group_names	extract and set group names
group_names.default	extract and set group names
group_names.incidence	extract and set group names
group_names<-	extract and set group names
group_names<-.default	extract and set group names
group_names<-.incidence	extract and set group names
incidence	Compute incidence of events from a vector of dates.
incidence.character	Compute incidence of events from a vector of dates.
incidence.Date	Compute incidence of events from a vector of dates.
incidence.default	Compute incidence of events from a vector of dates.
incidence.integer	Compute incidence of events from a vector of dates.
incidence.numeric	Compute incidence of events from a vector of dates.
incidence.POSIXt	Compute incidence of events from a vector of dates.
incidence_pal1	Color palettes used in incidence
incidence_pal1_dark	Color palettes used in incidence
incidence_pal1_light	Color palettes used in incidence
make_breaks	Plot function for incidence objects
palettes	Color palettes used in incidence
plot.incidence	Plot function for incidence objects
plot.incidence_fit	Plot function for incidence objects
plot.incidence_fit_list	Plot function for incidence objects
pool	Pool 'incidence' across groups
print.incidence	Compute incidence of events from a vector of dates.
print.incidence_fit	Fit exponential models to incidence data
print.incidence_fit_list	Fit exponential models to incidence data
scale_x_incidence	Plot function for incidence objects
subset.incidence	Subsetting 'incidence' objects
[.incidence	Subsetting 'incidence' objects
`group_names<-`.default	extract and set group names