intensity_PXD000022 {imputeLCMD}R Documentation

Dataset PXD000022 from ProteomeXchange.

Description

This dataset has been collected during a study designed to compare the protein content of the exosome-like vesicles (ELVs) released from C2C12 murine myoblasts during proliferation (ELV-MB), and after differentiation into myotuves (ELV-MT). The dataset within this package contains proteins intensity processed using MaxQuant. More information can be found on ProteomeExchange public repository (http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD000022) or in the original paper (see reference).

Usage

data(intensity_PXD000022)

Format

A data frame with 660 observations on the following 7 variables.

Protein.IDs

Peptides/Proteins names

Intensity.MB.1

a numeric vector

Intensity.MB.2

a numeric vector

Intensity.MB.3

a numeric vector

Intensity.MT.1

a numeric vector

Intensity.MT.2

a numeric vector

Intensity.MT.3

a numeric vector

Source

Original MaxQuant data: http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD000022

References

Forterre A, Jalabert A, Berger E, Baudet M, Chikh K, et al. (2014) Proteomic Analysis of C2C12 Myoblast and Myotube Exosome-Like Vesicles: A New Paradigm for Myoblast-Myotube Cross Talk? PLoS ONE 9(1): e84153. doi:10.1371/journal.pone.0084153


[Package imputeLCMD version 2.1 Index]