subsetCase {imcExperiment} | R Documentation |
subsets the imcExperiment to a case along with all slots for a single ROI, using for distance analysis
Description
subsets the imcExperiment to a case along with all slots for a single ROI, using for distance analysis
method to subset the slots, requires colData with column "ROIID"
Usage
subsetCase(object, value, ...)
## S4 method for signature 'imcExperiment'
subsetCase(object, value)
Arguments
object |
IMC container |
value |
this is ROIID a single character ID |
... |
additional parameters |
Value
returns IMC object of a single case
roi imcExperiment
Examples
data(imcdata)
myCase<-subsetCase(imcdata,"30-BM16-202_7Pre_s1_p1_r4_a4_ac")
myCase
data(imcdata)
myCase<-subsetCase(imcdata,"30-BM16-202_7Pre_s1_p1_r4_a4_ac")
myCase
[Package imcExperiment version 0.99.0 Index]