.imcExperimentToPPP {imcExperiment}R Documentation

map to point pattern from imcExperiment class.

Description

map to point pattern from imcExperiment class.

Usage

.imcExperimentToPPP(caseExperiment = NULL, phenotypeToUse = 1)

Arguments

caseExperiment

the subset IMC experiment to cast into a point pattern

phenotypeToUse

the cluster id to annotate the pattern

Value

imcExperiment container converted to a point pattern set


[Package imcExperiment version 0.99.0 Index]