afl2_rsid {ieugwasr} | R Documentation |
Look up allele frequencies and LD scores for 1000 genomes populations by rsid
Description
Look up allele frequencies and LD scores for 1000 genomes populations by rsid
Usage
afl2_rsid(rsid, reference = "1000g", opengwas_jwt = get_opengwas_jwt())
Arguments
rsid |
Vector of rsids |
reference |
Default= |
opengwas_jwt |
Used to authenticate protected endpoints. Login to https://api.opengwas.io to obtain a jwt. Provide the jwt string here, or store in .Renviron under the keyname OPENGWAS_JWT. |
Value
Data frame containing ancestry specific LD scores and allele frequencies for each variant
[Package ieugwasr version 1.0.1 Index]