add_pointer_struct |
Adds Pointer Structure to R objects |
aggregate_model |
A Function to Apply Multiple Aggregations to Model Output |
aggregate_model_internal |
An Internal Function to Aggregate Model Output Using other Idmodelr functions. |
combine_strat_model_output |
Reduces the Dimensionality of a Stratified Model |
combine_to_age_model |
Combine an Infectious Disease Model To a Demographic Model |
estimate_norm_dist_from_ci |
A Function to Estimate a Normal Distribution from Credible or Confidence Intervals |
gather_strat_multi_variable |
A Function to Gather Multiple Stratified Variables into a Tidy Format |
gather_strat_variable |
A Function to Gather a Stratified Variable into a Tidy Format |
generate_parameter_permutations |
A Function to Generate Parameter Permutations |
model_details |
Model Details |
model_df_to_vector |
Extracts a Single Column, Summarises if from Simulation |
parameter_details |
Parameter Details |
plot_model |
Plot Compartment Populations over Time for a Model Simulation |
required_parameters |
Lookup the Details of Parameters Required by a Model |
scenario_analysis |
A Function to Perform Scenario Analysis for a Generic Model Object. |
SEIRS_demographics_ode |
Susceptible-Exposed-Infected-Recovered-Susceptible Model with Simple Demographics |
SEIRS_ode |
Susceptible-Exposed-Infected-Recovered-Susceptible Model |
SEIR_demographics_ode |
Susceptible-Exposed-Infected-Recovered Model with Simple Demographics |
SEIR_ode |
Susceptible-Exposed-Infected-Recovered Model |
SEIS_demographics_ode |
Susceptible-Exposed-Infected-Susceptible Model with Simple Demographics |
SEIS_ode |
Susceptible-Exposed-Infected-Susceptible Model |
SEI_demographics_ode |
Susceptible-Exposed-Infected Model with Simple Demographics |
SEI_ode |
Susceptible-Exposed-Infected Model |
SHLIR_demographics_ode |
Susceptible-High-risk-latent-Low-risk-latent-Infected-Recovered Model with Simple Demographics |
SHLIR_ode |
Susceptible-High-risk-latent-Low-risk-latent-Infected-Recovered Model |
SHLITR_demographics_ode |
Susceptible-High-risk-latent-Low-risk-latent-Infected-Treated-Recovered Model with Simple Demographics |
SHLITR_ode |
Susceptible-High-risk-latent-Low-risk-latent-Infected-Treated-Recovered Model |
SHLITR_risk_demographics_ode |
Susceptible-High-risk-latent-Low-risk-latent-Infected-Treated-Recovered Model with Demographics, Stratified by Risk |
SHLITR_risk_ode |
Susceptible-High-risk-latent-Low-risk-latent-Infected-Treated-Recovered Model, Stratified by Risk |
simulate_model |
A Function to Simulate a Model from a Generic Simulation Function, with Pre and Post Processing |
SIRS_demographics_ode |
Susceptible-Infected-Recovered-Susceptible Model with Simple Demographics |
SIRS_ode |
Susceptible-Infected-Recovered-Susceptible Model |
SIRS_vaccination_demographics_ode |
Susceptible-Infected-Recovered-Susceptible Model with Simple Demographics and Vaccination |
SIRS_vaccination_ode |
Susceptible-Infected-Recovered-Susceptible Model with Vaccination |
SIR_demographics_ode |
Susceptible-Infected-Recovered Model with Simple Demographics |
SIR_ode |
Susceptible-Infected-Recovered Model |
SIR_vaccination_demographics_ode |
Susceptible-Infected-Recovered Model with Simple Demographics and Vaccination |
SIR_vaccination_ode |
Susceptible-Infected-Recovered Model with Vaccination |
SIS_demographics_ode |
Susceptible-Infected-Susceptible Model with Simple Demographics |
SIS_ode |
Susceptible-Infected-Susceptible Model |
SI_demographics_ode |
Susceptible-Infected Model with Simple Demographics |
SI_ode |
Susceptible-Infected Model |
solve_ode |
A Simple Wrapper for lsoda |
summarise_model |
Summarise a Model Simulation |
summarise_strat_var |
Sum a Stratified Variable |
summarise_var_by_strat |
Sum a Stratified Variable by Stratification Level |