iPRISM-package |
Intelligent Predicting Response to Cancer Immunotherapy Through Systematic Modeling |
cor_plot |
Correlation Plot with Significance Points |
data.cell |
data.cell |
data.path |
data.path |
data_sig |
data_sig |
ESscore |
Enrichment Score Calculation |
ESscore_weighted |
Weighted Enrichment Score Calculation |
genelist_cp |
TME gene list after random walks |
genelist_hla |
HLA gene list after random walks |
genelist_imm |
ICI gene list after random walks |
get_gsea_path |
Gene Set Enrichment Analysis (GSEA) using Multiplex Networks |
get_logiModel |
Fit Logistic Regression Model |
gseafun |
Gene Set Enrichment Analysis (GSEA) Function |
iPRISM |
Intelligent Predicting Response to Cancer Immunotherapy Through Systematic Modeling |
path_list |
path_list |
ppi |
A protein-protein physical interaction network (PPI network) |
pred_value |
Original Class Labels for Samples |
Seeds |
Seed Node Names |