Machine Learning of Hyperrectangular Gating Strategies for High-Dimensional Cytometry


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Documentation for package ‘hypergate’ version 0.8.5

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boolmat boolmat
channels_contributions channels_contributions
color_biplot_by_discrete Colors a biplot according to a vector with discrete values
contract contract
contract.update contract.update
coreloop coreloop
en.locator Wrapper to locator that plots segments on the fly
expand expand
expand.update expand.update
f f
fill_FNTN_matrix fill_FNTN_matrix
FNTN_matrix.recycle FNTN_matrix.recycle
F_beta F_beta
gate_from_biplot gate_from_biplot
hgate_info hgate_info
hgate_pheno hgate_pheno
hgate_rule hgate_rule
hgate_sample hgate_sample
hypergate hypergate
plot_gating_strategy plot_gating_strategy
polygon.clean Remove self intersection in polygons
reoptimize_strategy reoptimize_strategy
Samusik_01_subset 2000 events randomly sampled from the 'Samusik_01' dataset
subset_matrix_hg subset_matrix_hg
update_gate Updates a gate vector