drbounds {hwep}

Upper bounds on rates of double reduction

Description

Calculates the upper bounds of the double reduction parameters according to the complete equation segregation model. See Huang et. al. (2019) for details.

Usage

drbounds(ploidy)

Arguments

ploidy

The ploidy of the species. Should be even and at least 4.

Value

A vector of length floor(ploidy/4). Element i is the upper bound on the probability of i pairs of identical-by-double-reduction alleles being in an individual.

Author(s)

David Gerard

References

• Huang, K., Wang, T., Dunn, D. W., Zhang, P., Cao, X., Liu, R., & Li, B. (2019). Genotypic frequencies at equilibrium for polysomic inheritance under double-reduction. G3: Genes, Genomes, Genetics, 9(5), 1693-1706. doi:10.1534/g3.119.400132

Examples

drbounds(4)
drbounds(6)
drbounds(8)
drbounds(10)
drbounds(12)
drbounds(14)
drbounds(16)