default_run_gradient_method |
Function that runs gradient method for one deme. Wrapper function for stats::optim. |
ecr_metaepoch |
Function that runs one ecr metaepoch. Wrapper function for ecr::ecr. |
euclidean_distance |
Euclidean distance |
ga_metaepoch |
Function that runs one GA metaepoch. Wrapper function for GA::ga. |
gsc_max_fitness_evaluations |
Factory function for a global stopping condition that stops the computation after fitness function has been evaluated given number of times. |
gsc_metaepochs_count |
Factory function for a global stopping condition that stops the computation after given number of metaepochs. |
gsc_trivial |
Factory function for a global stopping condition that never stops the computation. It results in hms running until there are no more active demes. |
hms |
Maximization (or minimization) of a fitness function using Hierarchic Memetic Strategy. |
hms-class |
A S4 class representing a result of hms. |
lsc_max_fitness_evaluations |
Factory function for a local stopping condition that stops a deme after given number of fitness function evaluations has been made in that deme. |
lsc_metaepochs_without_active_child |
Factory function for a local stopping condition that stops a deme after given number of metaepochs have past since last metaepoch during which this deme had an active child. |
lsc_metaepochs_without_improvement |
Factory function for a local stopping condition that stops a deme after given number of consecutive metaeopochs without an improvement of the best solution found in that deme. |
lsc_trivial |
Factory function for a trivial local stopping condition that lets a deme be active forever. It is usually used in the root of a hms tree. |
manhattan_distance |
Manhattan distance |
MetaepochSnapshot-class |
A S4 class representing a snapshot of one metaepoch. |
plot-method |
Plot method for "hms" class. |
plotActiveDemes |
plotActiveDemes method for "hms" class. |
plotActiveDemes-method |
plotActiveDemes method for "hms" class. |
plotPopulation |
plotPopulation method for "hms" class. |
plotPopulation-method |
plotPopulation method for "hms" class. |
print-method |
Print method for class "hms". |
printBlockedSprouts |
printBlockedSprouts method for "hms" class. |
printBlockedSprouts-method |
printBlockedSprouts method for "hms" class. |
printTree |
printTree method for class "hms". |
printTree-method |
printTree method for class "hms". |
rtnorm_mutation |
Factory function that creates normal mutation function |
saveMetaepochsPopulations |
saveMetaepochsPopulations method for "hms" class. |
saveMetaepochsPopulations-method |
saveMetaepochsPopulations |
sc_max_metric |
Default sprouting condition based on given metric. |
show-method |
Show method for class "hms". |
summary-method |
Summary method for class "hms". |