GO_example {highDmean}

An example of GO term data

Description

A dataset containing the gene expressions for a Gene Ontology (GO) term on two phenotype groups: BCR/ABL and NEG. The id of the GO term is GO:0000003. The raw dataset is taken from ALL package. The data were preprocessed, for which the details are elaborated in Zhang and Wang (2020).

Usage

GO_example

Format

A list with two subsets of gene expression data.

X

A matrix containing gene expressions for the BCR/ABL group. The row id is for patient and the column id is for gene.

Y

A matrix containing gene expressions for the NEG group. The row id is for patient and the column id is for gene.

References

Zhang, H. and Wang, H. (2020). Result consistency of high dimensional two-sample tests applied to gene ontology terms with gene sets. Manuscript in review.