pop.freq {hierfstat}R Documentation

Allelic frequencies

Description

Estimates allelic frequencies for each population and locus

Usage

pop.freq(dat,diploid=TRUE)

Arguments

dat

a data frame where the first column contains the population to which the different individuals belong, and the following columns contain the genotype of the individuals -one locus per column-

diploid

specify whether the data set consists of diploid (default) or haploid data

Value

A list containing allele frequencies. Each element of the list is one locus. For each locus, Populations are in columns and alleles in rows

Author(s)

Jerome Goudet jerome.goudet@unil.ch

Examples

data(gtrunchier)
pop.freq(gtrunchier[,-2])

[Package hierfstat version 0.5-11 Index]