pairwise.neifst {hierfstat}

Estimates pairwise FSTs according to Nei (1987)

Description

Estimate pairwise FSTs according to Nei (1987)

Usage

pairwise.neifst(dat,diploid=TRUE)

Arguments

dat

A data frame containing population of origin as the first column and multi-locus genotypes in following columns

diploid

whether the data is from a diploid (default) or haploid organism

Details

FST are calculated using Nei (87) equations for FST', as described in the note section of basic.stats

Value

A matrix of pairwise FSTs

Author(s)

Jerome Goudet [e-mail]

References

Nei, M. (1987) Molecular Evolutionary Genetics. Columbia University Press

See Also

pairwise.WCfst genet.dist basic.stats

Examples

data(gtrunchier)
pairwise.neifst(gtrunchier[,-2],diploid=TRUE)