genind2hierfstat {hierfstat} | R Documentation |
Converts genind objects from adegenet into a hierfstat data frame
Description
Converts genind objects from adegenet into a hierfstat data frame
Usage
genind2hierfstat(dat,pop=NULL)
Arguments
dat |
a genind object |
pop |
a vector containing the population to which each individual belongs. If pop=NULL, pop taken from slot pop of the genind object |
Value
a data frame with nloci+1 columns and ninds rows. The first column contains the population identifier, the following the genotypes at each locus
Examples
## Not run:
library(adegenet)
data(nancycats)
genind2hierfstat(nancycats)
basic.stats(nancycats)
genet.dist(nancycats)
data(H3N2)
basic.stats(genind2hierfstat(H3N2,pop=rep(1,dim(H3N2@tab)[1])),diploid=FALSE)
## End(Not run)
[Package hierfstat version 0.5-11 Index]