Interface to the 'HDF5' Binary Data Format
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Documentation for package ‘hdf5r’ version 1.3.11
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A C D E F G H I L N O P R S T V misc
| hdf5r-package | hdf5r: A package to provide an interface to hdf5 from R |
-- A --
| as.character.factor_ext | Various functions for 'factor_ext' objects |
| as.data.frame.H5R | Various functions for 'H5R' objects |
| as.vector.H5R | Various functions for 'H5R' objects |
| as_hex | Convert a double or integer to hex |
-- C --
| c.factor_ext | Various functions for 'factor_ext' objects |
| c.H5D | Wrapper functions to provide an 'h5' compatible interface. |
| c.H5R | Various functions for 'H5R' objects |
| cbind.H5D | Wrapper functions to provide an 'h5' compatible interface. |
| cbind.H5R | Various functions for 'H5R' objects |
| coerce_to_factor | Various functions for 'factor_ext' objects |
| coercible_to_factor | Various functions for 'factor_ext' objects |
| createDataSet | Wrapper functions to provide an 'h5' compatible interface. |
| createGroup | Wrapper functions to provide an 'h5' compatible interface. |
| create_empty | Create an empty R-object according to a given HDF5 datatype |
-- D --
| dim.H5R | Various functions for 'H5R' objects |
| dim<-.H5R | Various functions for 'H5R' objects |
| dimnames.H5R | Various functions for 'H5R' objects |
| dimnames<-.H5R | Various functions for 'H5R' objects |
-- E --
| existsGroup | Wrapper functions to provide an 'h5' compatible interface. |
| extendDataSet | Wrapper functions to provide an 'h5' compatible interface. |
-- F --
| factor_ext | Create an extended factor |
| factor_ext_functions | Various functions for 'factor_ext' objects |
| flatten_df | Flatten a nested data.frame |
| format.H5R | Various functions for 'H5R' objects |
-- G --
| guess_chunks | Guess the dimension of a chunk |
| guess_dim | Guess the HDF5 datatype of an R object |
| guess_dtype | Guess the HDF5 datatype of an R object |
| guess_nelem | Guess the HDF5 datatype of an R object |
| guess_space | Guess the dataspace of an object |
-- H --
| h5 | Wrapper functions to provide an 'h5' compatible interface. |
| h5-wrapper | Wrapper functions to provide an 'h5' compatible interface. |
| H5A | Class for representing HDF5 attributes |
| H5A-class | Class for representing HDF5 attributes |
| h5attr | Interface for HDF5 attributes |
| h5attr<- | Interface for HDF5 attributes |
| h5attributes | Interface for HDF5 attributes |
| h5attr_names | Interface for HDF5 attributes |
| h5close | Wrapper functions to provide an 'h5' compatible interface. |
| h5const | All constants used in HDF5 |
| H5D | Class for representing HDF5 datasets |
| H5D-class | Class for representing HDF5 datasets |
| H5File | Class for interacting with HDF5 files. |
| h5file | Wrapper functions to provide an 'h5' compatible interface. |
| H5File-class | Class for interacting with HDF5 files. |
| h5flush | Wrapper functions to provide an 'h5' compatible interface. |
| h5garbage_collect | Trigger the HDF5 garbage collection |
| H5Group | Class for representing HDF5 groups |
| H5Group-class | Class for representing HDF5 groups |
| H5Group_access | Retrieve object from a group of file |
| H5P | Class for HDF5 property lists. |
| H5P-class | Class for HDF5 property lists. |
| H5P_ATTRIBUTE_CREATE | Class for HDF5 property list for attribute creation |
| H5P_ATTRIBUTE_CREATE-class | Class for HDF5 property list for attribute creation |
| H5P_CLASS | Class for HDF5 property list classes (not HDF5 property lists) |
| H5P_CLASS-class | Class for HDF5 property list classes (not HDF5 property lists) |
| H5P_DATASET_ACCESS | Class for HDF5 property list for dataset access |
| H5P_DATASET_ACCESS-class | Class for HDF5 property list for dataset access |
| H5P_DATASET_CREATE | Class for HDF5 property list for dataset creation |
| H5P_DATASET_CREATE-class | Class for HDF5 property list for dataset creation |
| H5P_DATASET_XFER | Class for HDF5 property list for dataset transfer |
| H5P_DATASET_XFER-class | Class for HDF5 property list for dataset transfer |
| H5P_FILE_ACCESS | Class for HDF5 property list for file creation |
| H5P_FILE_ACCESS-class | Class for HDF5 property list for file creation |
| H5P_FILE_CREATE | Class for HDF5 property list for file creation |
| H5P_FILE_CREATE-class | Class for HDF5 property list for file creation |
| H5P_LINK_ACCESS | Class for HDF5 property list for link access |
| H5P_LINK_ACCESS-class | Class for HDF5 property list for link access |
| H5P_LINK_CREATE | Class for HDF5 property list for link creation |
| H5P_LINK_CREATE-class | Class for HDF5 property list for link creation |
| H5P_OBJECT_COPY | Class for HDF5 property list for object copying |
| H5P_OBJECT_COPY-class | Class for HDF5 property list for object copying |
| H5P_OBJECT_CREATE | Class for HDF5 property list for object creation |
| H5P_OBJECT_CREATE-class | Class for HDF5 property list for object creation |
| H5R | Class for HDF5 Reference datatypes. |
| H5R-class | Class for HDF5 Reference datatypes. |
| H5RefClass | Base class that tracks the ids and allows for closing an id |
| H5RefClass-class | Base class that tracks the ids and allows for closing an id |
| H5R_DATASET_REGION | Class for HDF5 dataset-region references. |
| H5R_DATASET_REGION-class | Class for HDF5 dataset-region references. |
| H5R_functions | Various functions for 'H5R' objects |
| H5R_OBJECT | Class for HDF5 Object-references. |
| H5R_OBJECT-class | Class for HDF5 Object-references. |
| H5S | Class for representing HDF5 spaces |
| H5S-class | Class for representing HDF5 spaces |
| H5S_H5D_subset_assign | Selecting and assigning subsets of HDF5-Spaces and HDF5-Datasets |
| H5T | Class for HDF5 datatypes. |
| H5T-class | Class for HDF5 datatypes. |
| h5types | These are all types that are used in HDF5 |
| H5T_ARRAY | Class for HDF5 array datatypes. |
| H5T_ARRAY-class | Class for HDF5 array datatypes. |
| H5T_BITFIELD | Class for HDF5 integer-datatypes. |
| H5T_COMPLEX | Class for HDF5 complex datatypes |
| H5T_COMPLEX-class | Class for HDF5 complex datatypes |
| H5T_COMPOUND | Class for HDF5 compound datatypes. |
| H5T_COMPOUND-class | Class for HDF5 compound datatypes. |
| H5T_ENUM | Class for HDF5 enumeration datatypes. |
| H5T_ENUM-class | Class for HDF5 enumeration datatypes. |
| H5T_FLOAT | Class for HDF5 floating point datatypes. |
| H5T_FLOAT-class | Class for HDF5 floating point datatypes. |
| H5T_INTEGER | Class for HDF5 integer-datatypes. |
| H5T_INTEGER-class | Class for HDF5 integer-datatypes. |
| H5T_LOGICAL | Class for HDF5 logical datatypes. This is an enum with the 3 values FALSE, TRUE and NA mapped on values 0, 1 and 2. Is transparently mapped onto a logical variable |
| H5T_LOGICAL-class | Class for HDF5 logical datatypes. This is an enum with the 3 values FALSE, TRUE and NA mapped on values 0, 1 and 2. Is transparently mapped onto a logical variable |
| H5T_STRING | Class for HDF5 string datatypes. |
| H5T_STRING-class | Class for HDF5 string datatypes. |
| H5T_VLEN | Class for HDF5 variable-length datatypes. |
| H5T_VLEN-class | Class for HDF5 variable-length datatypes. |
| h5unlink | Wrapper functions to provide an 'h5' compatible interface. |
| h5version | Return the version of the HDF5-API |
-- I --
| is.factor_ext | Various functions for 'factor_ext' objects |
| is.h5file | Wrapper functions to provide an 'h5' compatible interface. |
| is.H5R | Various functions for 'H5R' objects |
| is.H5R_DATASET_REGION | Various functions for 'H5R' objects |
| is.H5R_OBJECT | Various functions for 'H5R' objects |
| is_hdf5 | Check if a file is an HDF5 file |
-- L --
| length.H5R | Various functions for 'H5R' objects |
| list-groups-datasets | List Groups and Datasets in object |
| list.attributes | Wrapper functions to provide an 'h5' compatible interface. |
| list.datasets | List Groups and Datasets in object |
| list.groups | List Groups and Datasets in object |
| list.objects | List Groups and Datasets in object |
-- N --
| names.H5File | Get the names of the items in the group or at the '/' root of the file |
| names.H5Group | Get the names of the items in the group or at the '/' root of the file |
| names.H5R | Various functions for 'H5R' objects |
-- O --
| openGroup | Wrapper functions to provide an 'h5' compatible interface. |
| openLocation | Wrapper functions to provide an 'h5' compatible interface. |
-- P --
| print.data.frame_ext | Print a data frame with extended factor objects |
| print.factor_ext | Various functions for 'factor_ext' objects |
| print.H5R | Various functions for 'H5R' objects |
-- R --
| rbind.H5D | Wrapper functions to provide an 'h5' compatible interface. |
| rbind.H5R | Various functions for 'H5R' objects |
| readDataSet | Wrapper functions to provide an 'h5' compatible interface. |
-- S --
| subset_assign_h5.H5D | Selecting and assigning subsets of HDF5-Spaces and HDF5-Datasets |
| subset_h5.H5D | Selecting and assigning subsets of HDF5-Spaces and HDF5-Datasets |
| subset_h5.H5S | Selecting and assigning subsets of HDF5-Spaces and HDF5-Datasets |
-- T --
| t.H5R | Various functions for 'H5R' objects |
| text_to_dtype | Convert a text description to a datatype |
-- V --
| values | Various functions for 'factor_ext' objects |
| values.default | Various functions for 'factor_ext' objects |
| values.factor | Various functions for 'factor_ext' objects |
| values.factor_ext | Various functions for 'factor_ext' objects |
-- misc --
| !=.factor_ext | Various functions for 'factor_ext' objects |
| $.types_env | Retrieving a copy of a type |
| ==.factor_ext | Various functions for 'factor_ext' objects |
| [.factor_ext | Various functions for 'factor_ext' objects |
| [.H5D | Selecting and assigning subsets of HDF5-Spaces and HDF5-Datasets |
| [.H5R | Various functions for 'H5R' objects |
| [.H5S | Selecting and assigning subsets of HDF5-Spaces and HDF5-Datasets |
| [<-.factor_ext | Various functions for 'factor_ext' objects |
| [<-.H5D | Selecting and assigning subsets of HDF5-Spaces and HDF5-Datasets |
| [<-.H5R | Various functions for 'H5R' objects |
| [[.factor_ext | Various functions for 'factor_ext' objects |
| [[.H5File | Retrieve object from a group of file |
| [[.H5Group | Retrieve object from a group of file |
| [[.types_env | Retrieving a copy of a type |
| [[<-.factor_ext | Various functions for 'factor_ext' objects |
| [[<-.H5File | Retrieve object from a group of file |
| [[<-.H5Group | Retrieve object from a group of file |