Presentation-Ready Data Summary and Analytic Result Tables

Documentation for package ‘gtsummary’ version 1.7.2

Help Pages

-- A --

add_ci	Add CI Column
add_ci.tbl_summary	Add CI Column
add_ci.tbl_svysummary	Add CI Column
add_difference	Add difference between groups
add_glance	Add Model Statistics
add_glance_source_note	Add Model Statistics
add_glance_table	Add Model Statistics
add_global_p	Add the global p-values
add_global_p.tbl_regression	Add the global p-values
add_global_p.tbl_uvregression	Add the global p-values
add_n.tbl_regression	Add N to regression table
add_n.tbl_summary	Add column with N
add_n.tbl_survfit	Add column with number of observations
add_n.tbl_svysummary	Add column with N
add_n.tbl_uvregression	Add N to regression table
add_nevent.tbl_regression	Add event N to regression table
add_nevent.tbl_survfit	Add column with number of observed events
add_nevent.tbl_uvregression	Add event N to regression table
add_nevent_regression	Add event N to regression table
add_n_regression	Add N to regression table
add_overall	Add column with overall summary statistics
add_overall.tbl_continuous	Add column with overall summary statistics
add_overall.tbl_custom_summary	Add column with overall summary statistics
add_overall.tbl_summary	Add column with overall summary statistics
add_overall.tbl_svysummary	Add column with overall summary statistics
add_p.tbl_continuous	P-values for 'tbl_continuous'
add_p.tbl_cross	Adds p-value to crosstab table
add_p.tbl_summary	Adds p-values to summary tables
add_p.tbl_survfit	Adds p-value to survfit table
add_p.tbl_svysummary	Adds p-values to svysummary tables
add_q	Add a column of q-values to account for multiple comparisons
add_significance_stars	Add significance stars
add_stat	Add a custom statistic column
add_stat_label	Add statistic labels
add_vif	Add Variance Inflation Factor
all_categorical	Select helper functions
all_continuous	Select helper functions
all_continuous2	Select helper functions
all_contrasts	Select helper functions
all_dichotomous	Select helper functions
all_interaction	Select helper functions
all_intercepts	Select helper functions
all_stat_cols	Select helper functions
all_tests	Select helper functions
as.data.frame.gtsummary	Convert gtsummary object to a tibble
as_flex_table	Convert gtsummary object to a flextable object
as_gt	Convert gtsummary object to a gt object
as_hux_table	Convert gtsummary object to a huxtable object
as_hux_xlsx	Convert gtsummary object to a huxtable object
as_kable	Convert gtsummary object to a kable object
as_kable_extra	Convert gtsummary object to a kableExtra object
as_tibble.gtsummary	Convert gtsummary object to a tibble

-- B --

bold_italicize_labels_levels	Bold or Italicize labels or levels in gtsummary tables
bold_labels	Bold or Italicize labels or levels in gtsummary tables
bold_labels.gtsummary	Bold or Italicize labels or levels in gtsummary tables
bold_labels.tbl_cross	Bold or Italicize labels or levels in gtsummary tables
bold_levels	Bold or Italicize labels or levels in gtsummary tables
bold_levels.gtsummary	Bold or Italicize labels or levels in gtsummary tables
bold_levels.tbl_cross	Bold or Italicize labels or levels in gtsummary tables
bold_p	Bold significant p-values or q-values

-- C --

check_gtsummary_theme	Set a gtsummary theme
combine_terms	Combine terms in a regression model
continuous_summary	Summarize a continuous variable
custom_tidiers	Collection of custom tidiers

-- F --

filter_p

Sort and filter variables in table by p-values

-- G --

get_gtsummary_theme

Set a gtsummary theme

-- I --

inline_text.gtsummary	Report statistics from summary tables inline
inline_text.tbl_cross	Report statistics from cross table inline
inline_text.tbl_regression	Report statistics from regression summary tables inline
inline_text.tbl_summary	Report statistics from summary tables inline
inline_text.tbl_survfit	Report statistics from survfit tables inline
inline_text.tbl_svysummary	Report statistics from summary tables inline
inline_text.tbl_uvregression	Report statistics from regression summary tables inline
italicize_labels	Bold or Italicize labels or levels in gtsummary tables
italicize_labels.gtsummary	Bold or Italicize labels or levels in gtsummary tables
italicize_labels.tbl_cross	Bold or Italicize labels or levels in gtsummary tables
italicize_levels	Bold or Italicize labels or levels in gtsummary tables
italicize_levels.gtsummary	Bold or Italicize labels or levels in gtsummary tables
italicize_levels.tbl_cross	Bold or Italicize labels or levels in gtsummary tables

-- M --

modify	Modify column headers, footnotes, spanning headers, and table captions
modify_caption	Modify column headers, footnotes, spanning headers, and table captions
modify_column_alignment	Modify Column Alignment
modify_column_hide	Modify Hidden Columns
modify_column_indent	Add/Remove Indentation
modify_column_merge	Modify Column Merging
modify_column_unhide	Modify Hidden Columns
modify_fmt_fun	Modify Formatting Functions
modify_footnote	Modify column headers, footnotes, spanning headers, and table captions
modify_header	Modify column headers, footnotes, spanning headers, and table captions
modify_spanning_header	Modify column headers, footnotes, spanning headers, and table captions
modify_table_body	Modify Table Body
modify_table_styling	Modify Table Styling

-- P --

plot	Plot Regression Coefficients
plot.tbl_regression	Plot Regression Coefficients
plot.tbl_uvregression	Plot Regression Coefficients
pool_and_tidy_mice	Collection of custom tidiers
print.tbl_split	Split gtsummary table
proportion_summary	Summarize a proportion

-- R --

ratio_summary	Summarize the ratio of two variables
remove_row_type	Remove rows by type
reset_gtsummary_theme	Set a gtsummary theme

-- S --

select_helpers	Select helper functions
separate_p_footnotes	Create footnotes for individual p-values
set_gtsummary_theme	Set a gtsummary theme
show_header_names	Modify column headers, footnotes, spanning headers, and table captions
sort_filter_p	Sort and filter variables in table by p-values
sort_p	Sort and filter variables in table by p-values
style_number	Style numbers
style_percent	Style percentages
style_pvalue	Style p-values
style_ratio	Style significant figure-like rounding for ratios
style_sigfig	Style significant figure-like rounding

-- T --

tbl_butcher	Reduce size of gtsummary objects
tbl_continuous	Summarize a continuous variable
tbl_cross	Create a cross table of summary statistics
tbl_custom_summary	Create a table of summary statistics using a custom summary function
tbl_merge	Merge two or more gtsummary objects
tbl_regression	Display regression model results in table
tbl_regression.default	Display regression model results in table
tbl_split	Split gtsummary table
tbl_split.gtsummary	Split gtsummary table
tbl_stack	Stacks two or more gtsummary objects
tbl_strata	Stratified gtsummary tables
tbl_strata2	Stratified gtsummary tables
tbl_summary	Create a table of summary statistics
tbl_survfit	Creates table of survival probabilities
tbl_survfit.data.frame	Creates table of survival probabilities
tbl_survfit.list	Creates table of survival probabilities
tbl_survfit.survfit	Creates table of survival probabilities
tbl_svysummary	Create a table of summary statistics from a survey object
tbl_uvregression	Display univariate regression model results in table
theme_gtsummary	Available gtsummary themes
theme_gtsummary_compact	Available gtsummary themes
theme_gtsummary_continuous2	Available gtsummary themes
theme_gtsummary_eda	Available gtsummary themes
theme_gtsummary_journal	Available gtsummary themes
theme_gtsummary_language	Available gtsummary themes
theme_gtsummary_mean_sd	Available gtsummary themes
theme_gtsummary_printer	Available gtsummary themes
tidy_bootstrap	Collection of custom tidiers
tidy_gam	Collection of custom tidiers
tidy_robust	Collection of custom tidiers
tidy_standardize	Collection of custom tidiers
tidy_wald_test	Collection of custom tidiers
trial	Results from a simulated study of two chemotherapy agents

-- W --

with_gtsummary_theme

Set a gtsummary theme