aCO2_inverse |
Concentration representative year |
add_lines |
Add data to a ggplot |
analyze_parameter_scan |
Analyze results of a parameter scan |
append_to_table |
Write *data* to supplied file in append mode without generating a warning message. |
atmospheric_CO2 |
Atmospheric CO2 concentration |
autocut |
autocut |
box_smooth |
Endpoint smoother |
browse |
Debugging utilities |
browse_end |
Debugging utilities |
build_functional_group |
Build the effective functional group as a weighted linear combination. |
check_for_package |
Check if *package* is available |
Combinator |
Combinator |
compare.R |
Compare simulation results |
create_combinations |
Create Valid Combinations |
create_example_environment |
Provide an example ModvegeEnvironment |
ensure_table_columns |
Check if supplied table contains all *required* variables. |
ensure_unique_filename |
Replace given filename by a version that contains an incremental number in order to prevent overwriting existing files. |
fCO2_growth_mod |
CO2 growth modifier |
fCO2_transpiration_mod |
CO2 transpiration modifier |
FG_A |
Functional group A |
FG_B |
Functional group B |
FG_C |
Functional group C |
FG_D |
Functional group D |
fPAR |
Radiation limitation |
fT |
Temperature limitation |
FunctionalGroup |
Representation of a grassland plant population |
fW |
Water stress |
get_annual_gross_yield |
Lookup table returning expected annual gross yields as function of elevation and management intensity. |
get_bias |
Metric Functions |
get_end_of_cutting_season |
Last day of cutting season |
get_expected_n_cuts |
Get number of expected cuts |
get_relative_cut_contribution |
Relative cut contribution |
get_site_name |
Extract the name of a site from a filename |
growR_package_options |
Default options introduced by package growR |
growR_run_loop |
Run growR simulations |
load_data_for_sites |
Load experimental data |
load_matching_data |
Load experimental data |
load_measured_data |
Load experimental data |
logger |
Primitive logger for debugging. |
make_yearDOY |
Create unique DOY + year identifier |
ManagementData |
Management Data Class |
management_parameters |
Management practices for Swiss grasslands |
mean_absolute_error |
Metric Functions |
metric_map |
List of Performance Metrics |
ModvegeEnvironment |
growR environment data |
ModvegeParameters |
Parameter Data Object |
ModvegeSite |
ModvegeSite |
parameter_scan_example |
Example results of a parameter scan |
parse_year_strings |
Parse and generate lists of years. |
plot.ModvegeSite |
Plot ModVege simulation result overview |
plot_parameter_scan |
Plot Parameter Scan Results |
posieux_weather |
Example Weather Data |
PscanPlotter |
Plot Parameter Scan Results |
read_config |
Read simulation run configurations from file |
root_mean_squared |
Metric Functions |
run_parameter_scan |
Parameter Scan |
SEA |
Seasonal effect on growth |
setup_directory |
Initialize growR directory structure |
set_growR_verbosity |
Set verbosity of growR output. |
start_of_growing_season |
Determine start of growing season |
start_of_growing_season_mtd |
Multicriterial Thermal Definition |
WeatherData |
Weather Data Object |
weighted_temperature_sum |
Create a weighted temperature sum |
willmott |
Willmott Index |
yield_parameters |
Parameters for expected yields in Switzerland |