data_1w_death |
In vitro experiments measuring percentage cell death in three genotypes of cells. |
data_2w_Festing |
Data from two-way ANOVA with randomised block design of treatments of strains of mice. |
data_2w_Tdeath |
In vitro measurement of percentage cell death - two-way ANOVA design with repeated measures, and randomised blocks. |
data_cholesterol |
Hierarchical data from 25 subjects either treated or not at 5 hospitals - two-way ANOVA design with repeated measures. |
data_doubling_time |
Doubling time of E.coli measured by 10 students three independent times. |
data_t_pdiff |
Matched data from two groups where difference between them is consistent. |
data_t_pratio |
Matched data from two groups where ratio between them is consistent. |
data_zooplankton |
Time-series data on zooplankton in lake Menon. |
ga_anova |
ANOVA table from a generalised additive model ('gam') |
ga_model |
Fit a generalised additive model ('gam') |
get_graf_colours |
Get graf internal |
graf_colours |
List of hexcodes of colours in grafify palettes |
graf_col_palette |
Call 'grafify' palettes for scale & fill functions |
graf_col_palette_default |
Call 'grafify' palettes for scale & fill functions |
graf_palettes |
List of palettes available in grafify package |
make_1way_data |
Make one-way or two-way independent group or randomised block design data. |
make_1way_rb_data |
Make one-way or two-way independent group or randomised block design data. |
make_2way_data |
Make one-way or two-way independent group or randomised block design data. |
make_2way_rb_data |
Make one-way or two-way independent group or randomised block design data. |
mixed_anova |
ANOVA table from linear mixed effects analysis. |
mixed_anova_slopes |
ANOVA table from linear mixed effects analysis. |
mixed_model |
Model from a linear mixed effects model |
mixed_model_slopes |
Model from a linear mixed effects model with varying slopes |
plot_3d_point_sd |
Plot of mean & error bars for 1-way ANOVAs with matched shapes mapped to blocking factor. |
plot_3d_scatterbar |
Plot a bar graph for 1-way ANOVAs with matched shapes mapped to blocking factor. |
plot_3d_scatterbox |
Plot a scatter and box plot for 1-way ANOVAs with matched shapes mapped to blocking factor. |
plot_3d_scatterviolin |
Plot a scatter with violin & box plot for 1-way ANOVAs with matched shapes mapped to blocking factor. |
plot_4d_point_sd |
Plot mean & error bars for 2-way ANOVAs with or without a blocking factor. |
plot_4d_scatterbar |
Plot scatter plot with bar & error bars for 2-way ANOVAs with or without a blocking factor. |
plot_4d_scatterbox |
Plot scatter, box & whiskers for 2-way ANOVAs with or without a blocking factor. |
plot_4d_scatterviolin |
Plot scatter, box & violin for 2-way ANOVAs with or without a blocking factor. |
plot_befafter_box |
Before-after style graph with a boxplot |
plot_befafter_colors |
Plot a before-after plot with lines joining colour-matched symbols. |
plot_befafter_colours |
Plot a before-after plot with lines joining colour-matched symbols. |
plot_befafter_shapes |
Plot a before-after plot with lines joining shape-matched symbols. |
plot_density |
Plot density distribution of data. |
plot_dotbar_sd |
Plot a dotplot on a bar graph with SD error bars with two variables. |
plot_dotbox |
Plot a dotplot on a boxplot with two variables. |
plot_dotviolin |
Plot a dotplot on a violin plot with two variables. |
plot_gam_predict |
Plot prediction of 'gam' model |
plot_grafify_palette |
See grafify colour palettes |
plot_histogram |
Plot data distribution as histograms. |
plot_lm_predict |
Plot data and predictions from linear model |
plot_logscale |
Add log transformations to graphs |
plot_point_sd |
Plot a point as mean with SD error bars using two variables. |
plot_qqline |
Plot quantile-quantile (QQ) graphs from data. |
plot_qqmodel |
Plot quantile-quantile (QQ) graphs from residuals of linear models. |
plot_qq_gam |
Plot model diagnostics for generalised additive models |
plot_scatterbar_sd |
Plot scatter dots on a bar graph with SD error bars with two variables. |
plot_scatterbox |
Plot a scatter plot on a boxplot with two variables. |
plot_scatterviolin |
Plot a scatter plot on a violin plot with two variables. |
plot_xy_CatGroup |
Plot points on a quantitative X - Y plot & a categorical grouping variable. |
plot_xy_NumGroup |
Plot points on a quantitative X - Y plot & a numeric grouping variable. |
posthoc_Levelwise |
Level-wise post-hoc comparisons from a linear or linear mixed effects model. |
posthoc_Pairwise |
Pairwise post-hoc comparisons from a linear or linear mixed effects model. |
posthoc_Trends_Levelwise |
Use emtrends to get level-wise comparison of slopes from a linear model. |
posthoc_Trends_Pairwise |
Use emtrends to get pairwise comparison of slopes from a linear model. |
posthoc_Trends_vsRef |
Use emtrends to get level-wise comparison of slopes from a linear model. |
posthoc_vsRef |
Post-hoc comparisons to a control or reference group. |
scale_color_grafify |
'scale_colour_' and 'scale_fill_' functions |
scale_colour_grafify |
'scale_colour_' and 'scale_fill_' functions |
scale_fill_grafify |
'scale_colour_' and 'scale_fill_' functions |
simple_anova |
ANOVA table from a linear model fit to data. |
simple_model |
Model from a linear model fit to data. |
table_summary |
Get numeric summary grouped by factors |
table_x_reorder |
Reordering groups along X-axis |
theme_grafify |
A modified 'theme_classic()' for 'grafify'-like graphs. |