Interface to the 'g:Profiler' Toolset


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Documentation for package ‘gprofiler2’ version 0.2.3

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gconvert Gene ID conversion.
get_base_url Get the current base URL.
get_tls_version Get the TLS version for SSL
get_user_agent Get current user agent string.
get_version_info Get version info of g:Profiler data sources
gorth Orthology search.
gost Gene list functional enrichment.
gostplot Manhattan plot of functional enrichment results.
gsnpense Convert SNP rs identifiers to genes.
mapViridis Map vector of numeric values to Viridis color scale.
publish_gostplot Create and save an annotated Manhattan plot of enrichment results.
publish_gosttable Create and save a table with the functional enrichment analysis results.
random_query Generate a random gene list for testing.
set_base_url Set the base URL.
set_tls_version Set the TLS version to use for SSL
set_user_agent Set custom user agent string.
upload_GMT_file Upload custom annotations for functional enrichment analysis in g:GOSt.