gomms-package {gomms}

GLM-Based Ordination Method

Description

preliminary analysis of similarity between samples in a low (2 or 3) dimensional display.

Author(s)

Michael B. Sohn

Maintainer: Michael B. Sohn <[e-mail]>

References

Sohn, M.B. and Li, H. (2017). A GLM-Based Latent Variable Ordination Method for Microbiome Samples (Submitted).

Examples

## Not run: 
# load test data

data(gomms_test_data);

# estimate factor scores
cdat <- as.matrix(gomms_test_data[,-ncol(gomms_test_data)]);
rslt <- gomms(cdat);

# plot estimated factor scores
y <- as.matrix(gomms_test_data$group);
gomms.plot(rslt, y);

## End(Not run)