Create Muller Plots of Evolutionary Dynamics

---

Documentation for package ‘ggmuller’ version 0.5.6

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

add_empty_pop	Modify a dataframe to enable plotting of populations instead of frequencies
add_start_points	Add rows to a population dataframe to ensure genotype starting points are plotted correctly
adj_matrix_to_tree	Create a tree object of class "phylo" from an adjacency matrix
branch_singles	Add branches of length zero to get rid of single nodes in an adjacency matrix
example_df	Example dataframe
example_edges	Example adjacency matrix
example_pop_df	Example population dataframe
find_start_node	Move to top of adjacency matrix
get_edges	Extract an adjacency matrix from a larger data frame
get_Muller_df	Create a data frame from which to create a Muller plot
get_population_df	Extract population data from a larger data frame
move_down	Move to daughter in adjacency matrix
move_right	Move to sibling in adjacency matrix
move_up	Move to parent in adjacency matrix
Muller_plot	Draw a Muller plot of frequencies using ggplot2
Muller_pop_plot	Draw a Muller plot of population sizes using ggplot2
path_vector	Record a path through all nodes of an adjacency matrix
reorder_by_vector	Reorder a Muller plot dataframe by a vector