check_genie_access |
Check Access to GENIE Data |
create_analytic_cohort |
Select cohort of patients for analysis |
drug_regimen_list |
List of Drug Regimen Names by Cohort |
drug_regimen_sunburst |
Visualize drug regimen sequences in a sunburst plot |
genie_panels |
Genomic Panels Included in GENIE BPC Data |
nsclc_test_data |
Simulated fake GENIE BPC data for function examples and tests |
pull_data_synapse |
Obtain clinical & genomic data files for GENIE BPC Project |
regimen_abbreviations |
List of Drug Regimen Abbreviations |
select_unique_ngs |
Selecting corresponding unique next generation sequencing reports |
set_synapse_credentials |
Connect to 'Synapse' API |
synapse_tables |
'Synapse' table IDs |
synapse_version |
Return list of available GENIE BPC data releases |