genemodel.plot {genemodel}

genemodel.plot

Description

This function plots a gene model

Usage

genemodel.plot(model, start, bpstop, orientation, xaxis = TRUE)

Arguments

model

data.frame containing model information. Required columns are "type", "coordinates"

start

start position

bpstop

stop position

orientation

either "foward" or "reverse" indicates the direction of transcription

xaxis

default is TRUE and adds axis above gene model showing position

Examples

data(AT5G62640)
genemodel.plot(AT5G62640, 25149433, 25152541, "reverse", xaxis=TRUE)