checkRates {genSEIR}

Check Rates

Description

This function compares the fitted and calculated death and recovered ratios. The idea is to check whether the approximation of these ratios is appropriate.

Usage

checkRates(time, Q, R, D, kappaFun, lambdaFun, kappa, lambda, dt = 1)

Arguments

time

time vector

Q

time histories of the quarantined/active cases

R

time histories of the recovered cases

D

time histories of the deceased cases

kappaFun

anonymous function approximating the death rate

lambdaFun

anonymous function approximating the recovery rate

kappa

mortality rate

lambda

cure rate

dt

a time step, default is 1/24. This oversample time to ensure that the algorithm converges.

Value

plots for death rate and recovery rate

Author(s)

Selcuk Korkmaz, [e-mail]

References

Peng, L., Yang, W., Zhang, D., Zhuge, C., Hong, L. 2020. “Epidemic analysis of COVID-19 in China by dynamical modeling”, arXiv preprint arXiv:2002.06563.

https://www.mathworks.com/matlabcentral/fileexchange/74545-generalized-seir-epidemic-model-fitting-and-computation

See Also

SEIQRDP fit_SEIQRDP