GCxGC Preprocessing and Analysis

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Documentation for package ‘gcxgclab’ version 1.0.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

align	Reference Batch Align
batch_eic	Finds batch of EICs
batch_ms	Finds batch of mass spectra
batch_preprocess	Batch reprocessing
bl_corr	Baseline correction
comp_nist	Compares MS to NIST MS database
comp_peaks	Compare Peaks
extract_data	Extracts data from cdf file.
find_eic	Finds EICs
find_ms	Finds MS
gauss	1D Gaussian function
gauss2	2D Gaussian function
gauss2_fit	Fitting to 2D Gaussian curve
gauss_fit	Fitting to Gaussian curve
mass_list	Creates list of atomic mass data
nist_list	Creates list of NIST data
non_targeted	Compares MS to atomic mass data
phase_shift	Phase shift
plot_chr	Plot chromatogram
plot_defect	Plots the Kendrick Mass Defect of a peak
plot_eic	Plots the EICs
plot_gauss	Plots a peak with the fitted Gaussian curve.
plot_gauss2	Plots a 3D peak with the fitted Gaussian curve.
plot_ms	Plots the mass spectra of a peak.
plot_nist	Plots the mass spectra of a NIST compound.
plot_peak	Peak Plot
plot_peakonly	Plot only peaks
preprocess	Preprocessing
smooth	Smoothing
targeted	Targeted Analysis
thr_peaks	Threshold Peaks
top_peaks	Top Peaks