Genetic Distance Segmentation for Population Genetics
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Documentation for package ‘fst4pg’ version 1.0.0
Help Pages
| BuildFreqNbG | Convert the Freq and NbGamete tables into a list. |
| Compute_Denominator | Computation of the numerator of the moment estimator |
| Compute_Nominator | Computation of the numerator of the moment estimator |
| ContrastGraphSummary | ContrastGraphSummary |
| ContrastSummary | ContrastSummary |
| ContrastTopRegions | ContrastTopRegions |
| DF4Plot1Prof | DF4Plot1Prof |
| Freq | Frequencies of the American and European HGDP populations |
| Freq.filt | Filtering markers based on allelic frequencies |
| HeatMap | HeatMap |
| HudsonFst.gw | HudsonFst.gw |
| HudsonFst.m | HudsonFst.m |
| HudsonFst.plot | Plot Fst values along chromosomes |
| HudsonFst.prof | HudsonFst.prof |
| Info | Marker information |
| MakeProfile.op | MakeProfile.op |
| MakeProfile.sn_nomemory | MakeProfile.sn_nomemory |
| MergeRegion | MergeRegion |
| NbGamete | Number of gametes of the American and European HGDP populations |
| Plot1Prof | Plot1Prof |
| ProfilingSummary | ProfilingSummary |
| Ratio_Average | Computation of the Fst moment estimator |
| RawPlot | RawPlot |
| Summarise1Profile | Summarise1Profile |